EPFL Center for Imaging, Director
Lausanne, VD, Switzerland
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- Following 397
- Followers 875
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Simon F. Nørrelykke retweeted
📸 🚞 A successful summerschool is not only about exploring cutting-edge imaging methods but also about building connections and creating memorable experiences. Short mountain excursion with breathtaking views over Lake Geneva
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#EPFLImaging #EPFLImagingSummerschool
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Simon F. Nørrelykke retweeted
💻🔬☀️ Our 6th Imaging Summerschool has officially started!
Welcome to our motivated group of PhD students from a wide range of disciplines. Beautiful environment = perfect setting for learning and new connections.
#EPFLImaging #EPFLImagingSummerschool
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Simon F. Nørrelykke retweeted
🔬Are you interested in applying colocalization analysis to your microscopy image data?
💡Check out my new video on colocalization metrics on the @COBA_NIH youtube channel!
piped.video/watch?v=Ktx9oOXV…
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Simon F. Nørrelykke retweeted
Day 1 & 2 of #bobiac2025 🐍
With basics of Python in the bag, it was time to analyze images: image handling, pre-processing, cell segmentation and ilastik.
We could not have organized this course without the generous support of @BioimagingNA. Thank you!
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First day of #bobiac2025. Six days of intensive Python based #BioImageAnalysis. Intro by @FedeGasparoli - "This will be a long week, but it will change your life".
iac.hms.harvard.edu/bobiac/2…
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Simon F. Nørrelykke retweeted
Broad's Machine Learning in Drug Discovery Symposium coming soon! Nov 7, 2025. Another great lineup.
In person (Cambridge MA) and online options
Register by July 4 for a discount
broadinstitute.org/machine-l…
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Simon F. Nørrelykke retweeted
Happy #MicroscopyMonday! #microscopycommunity- last days to submit your abstract for GBIxBINA 2025! Abstracts are due June 25. Join us in Montreal and share your work with the global bioimaging community & explore cutting-edge advancements
Register here: buff.ly/mKnckTG
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Simon F. Nørrelykke retweeted
Come and work with us!
Super exciting and relevant projects!
Become an #AI pro and do something positive for the 🌍! 👩🎓 🧑🎓
🚀 Fully-funded #PhD opportunity in Computational Biology with our @florianjug @jug_lab through @polimi DADS programme! Co-supervision by @FraIev84
🧬 Use #AI to decode complex biological data across scales.
Apply by 9 July 👉 humantechnopole.it/en/news/1…
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Simon F. Nørrelykke retweeted
‼️3 days left to apply to the Boston Bioimage Analysis Course (BoBiAC)! 💻
Get started w/Python & learn to perform segmentation, classification & colocalization on fluorescence microscopy images — no programming experience required!
🗓️ Apply by June 1st!
iac.hms.harvard.edu/bobiac/2…
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Simon F. Nørrelykke retweeted
Our next Training Grant deadline is 6 June. If you’d like to attend a microscopy or bioimage analysis workshop in the next 6 months to support your research in #cellbio, but don’t have sufficient funding, check out the details: biologists.com/grants/jcs-fo…
Clara Hayn @CHaynOrganos blogs about the @Fr_BioImaging Advanced Training course covering light-sheet microscopy and its application to neuroscience and 3D cell culture. Clara was supported by a @J_Cell_Sci-FocalPlane Training Grant.
focalplane.biologists.com/20…
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Great work by group member @iRanitK that should be relevant for anyone wanting to measure how well their segmentation algorithms are performing.
🚨 New paper out: SoftPQ – a robust metric for instance segmentation 🧠📊
Hard IoU thresholds miss the nuance. We propose:
✔️ Soft matching
✔️ Tunable thresholds
✔️ Sublinear penalties
Rovust, interpretable evaluation.
📄 Paper: ⬇️
arxiv.org/abs/2505.12155
w/ @SimonFlyvbjerg
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Simon F. Nørrelykke retweeted
🚨 Job Alert. Like and retweet! The @EPFL_Imaging
Center and the CIME (Interdisciplinary Center for Electron Microscopy) are looking for an
expert for data analysis and processing! lnkd.in/eaZuhWjp
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Thanks to generous support from @BioimagingNA we now have even more fee-waivers for our workshop.
No funds, but want to learn? Apply below.
💻 Apply to our beginner-friendly Boston Bioimage Analysis Course!
Get started with Python and learn to analyze fluorescence microscopy images—no coding experience required!
Fee waivers available thanks to funding from @BioimagingNA!
🗓️ Apply June 1st!
iac.hms.harvard.edu/bobiac/2…
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Simon F. Nørrelykke retweeted
[TRAINING] Apply for the new EMBO Course📢
Practical courses on advanced #bioimageanalysis, including image analysis workflows, data management, deep-learning...
For early-career/image analysis scientists
📅 Sep 14–19, 2025
🌍 On site or online
📌Apply by June 4
🔗Link in coms
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Simon F. Nørrelykke retweeted
‼BREAKING‼
New funding secured for the Boston Bioimage Analysis Course (BoBiAC) this July at @harvardmed. Fees down 37%, with waivers for academic applicants, for an intensive hands-on intro to bioimage analysis with Python!
Apply by June 1st!
iac.hms.harvard.edu/bobiac/2…
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Simon F. Nørrelykke retweeted
GloBIAS #BioimageAnalysis #Conference 2025 – we have opened the registration for our 2025 in-person event. Please check the webpage lnkd.in/eWqkEDxg for more information and the link to the registration form.
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Simon F. Nørrelykke retweeted
🚨Workshop Latinoamericano de CellProfiler🚨
El @CiminiLab del @broadinstitute, junto a @COBA_NIH están organizando un Workshop Introductorio a CellProfiler para Latinoamérica gratuito, online y en ESPAÑOL🇪🇸/PORTUGUÉS 🇧🇷!!🎉🎊
broad.io/latam_workshop2025
Fecha límite: 23/4/2025
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This summer, we are running a one-week intensive workshop on Python-based BioImage Analysis.
Are there better ways to spend 6 days in mid-July in Boston? Probably.
Would you learn as much as you will here? Probably not.
Apply here:
iac.hms.harvard.edu/bobiac/2…
Announcing the Boston Bioimage Analysis Course — BoBiAC! Join us this July at @harvardmed in Boston for a 6-day deep dive into bioimage analysis with Python, hosted by @HMS_IAC and @cite_at_hms.
Apply by May 16th 2025!
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Simon F. Nørrelykke retweeted
Join us for our first workshops of 2025!
📌 Image analysis with ImageJ/Fiji
📆 Date: Jan 22 & 24, 2025
🔗 tinyurl.com/iac-fiji-2025012…
📌 ImageJ/Fiji's macro language
📆 Date: Jan 28, 2025
🔗 tinyurl.com/iac-fiji-macro-2…
📍 Location: @harvardmed campus
Open to all—don't miss out!
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Simon F. Nørrelykke retweeted
If you would like to attend a #microscopy or #bioimageanalysis training course in the next ~6 months but don’t have funding, check out our JCS-FocalPlane Training Grant to see if you are eligible.
Next deadline: 22 November 2024
biologists.com/grants/jcs-fo…
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