The BioImage Archive at EMBL-EBI stores and distributes biological images that are useful to life-science researchers. bsky.app/profile/bioimagearc….
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BioImage Archive retweeted
🚨 Save the Date! 🚨
AI4Life & @GloBIAS_ are hosting a 4-part webinar series to showcase AI4Life services and lessons learned.
📅 When: Feb 13, Apr 10, Jun 12, Aug 14
🖥️ How: Online | 🎥 Recorded
🔗 Registration: bit.ly/registration-globias-…
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BioImage Archive retweeted
Deadline extension alert! You now have until 19 January to apply for this course that will show how public bioimaging data resources, centred around the @BioimageA, enable and enhance machine learning based image analysis: ebi.ac.uk/training/events/mi…
ALT Course at EMBL-EBI Microscopy data analysis: machine learning and the BioImage Archive 31 Mar - 4 Apr 2025 Virtual
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Join our wonderful team at EMBL-EBI! We are hiring a data steward with #microscopy experience. You will get to collaborate with scientists and provide training to address the imaging community needs in data management #BioImaging #DataSteward
embl.org/jobs/position/EBI02…
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You can now find us on @bluesky! bsky.app/profile/bioimagearc…
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BioImage Archive retweeted
Looking for a recipe for depositing bioimage #data in the @BioimageA? Check out the step-by-step process developed by #EuroBioImaging's FAIR Image Data Steward published in @ELIXIREurope's #FAIRdata Cookbook⤵️
faircookbook.elixir-europe.o…
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BioImage Archive retweeted
Wrapping up a fantastic week at the #BioHackEU24 🎉 Project 17 worked (also) on the future integration of @BioimageA and @bioimageio with #useGalaxy, which will enable automatic import of both images and #AI models, streamlining automated #ImageAnalysis workflows.
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Starting the second day of the #foundingGIDE meeting in Okazaki, Japan. All about metadata, data models and ontologies and why we need them:
ALT Photo of presentation on data model, metadata and vocabularies
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BioImage Archive retweeted
Day 1 of the #foundingGIDE Community Event wrapped up with a dynamic panel on open science and image #DataManagement.
Representatives from @EuroBioImaging, @UNESCO, @NIG_idenken, @EMBL, @emblebi and @zeiss_micro discussed data accessibility and #Interoperability in #bioimaging
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BioImage Archive retweeted
Life scientists! The 3rd (and last) AI4Life Open Call is officially open! 🎉 We are offering deep learning support for bioimage analysis. Apply now!
🔗 ai4life.eurobioimaging.eu/th…
⏳ Deadline: December 10, 2024
@REA_research #AI #Bioimaging #Imaging #ImageAnalysis #DeepLearning
ALT Open Call for Bioimage Analysis Support - Do you need help applying Deep Learning to your research? Apply by December 10, 2024 https://ai4life.eurobioimaging.eu/third-open-call/ ai4life@eurobioimaging.eu https://ai4life.eurobioimaging.eu/
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BioImage Archive retweeted
#foundingGIDE Community Event is ON 📢 hosted by @riken_en in Okazaki 🇯🇵
Looking at 1.5 days full of insights into how we as a community can enhance image data #interoperability, harmonizing #metadata and #ontology to lay the foundations of a Global Image Data Ecosystem #GIDE!
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BioImage Archive retweeted
How can you take your data one important step closer to #FAIRdata 🤔? Check out #EuroBioImaging's FAIR image data decision tree🌳- designed to guide you in the selection of appropriate repositories.
Separate trees exist for different image data types!
Check it out⤵️
zenodo.org/records/13945179
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We're thrilled to be contributing to the new Human Protein Atlas release (full of new features!) by making over 10 million raw images accessible to all🌐Dive in to this expansive - 300 TB- image dataset that helped unlock insights into human protein expressions! #OpenScience
A new version 24 of the Human Protein Atlas resource has been released at the HUPO meeting in Dresden, Germany. The data is summarized in eight resources covering different aspects of human protein-coding genes in tissues, cells, cell lines and blood.
proteinatlas.org/news/2024-1…
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BioImage Archive retweeted
If you didn't yet have enough good reasons to share your bioimage data, Matthew (@BioimageA), Josh (@notjustmoore), Erin (@tuesdaystitches), Assaf (@AssafZaritsky) and I are here with squirrel drawings to convince you that you should do it:
journals.biologists.com/jcs/…
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BioImage Archive retweeted
@BioimageA is a key partner in AI4Life, contributing significantly to the standardization of metadata for AI-ready datasets—a highly relevant topic in the bioimaging community! 🔥
Check out the preprint that details this work: arxiv.org/abs/2311.10443
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Today we showed how we are making our #AI-ready datasets #FAIR at the @AI4LifeTeam general assembly at @humantechnopole!
Demo 3 is titled "FAIR - not just a buzzword!" with (1/3) @BioimageA covering FAIR #AI-ready datasets
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BioImage Archive retweeted
There’s still time to join tomorrow’s #webinar to discover the utilisation of #WebAtlas and @BioimageA in visualising #spatialtranscriptomics and imaging data. Registration is free but essential: ebi.ac.uk/training/events/vi… #singlecell #DataScience
@sangerinstitute @bayraktar_lab
ALT Graphics image showing webinar at EMBL-EBI about Visualising integrated single cell and spatial transcriptomics datasets. The webinar will run on 09 October 2024 at 15:30 BST. The speakers are Omer Bayraktar and Aybuke Kupcu Yoldas. Image credit: Karen Arnott, EMBL-EBI
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BioImage Archive retweeted
📢Frontiers in Bioimaging 2024: Book now!
Don't miss this great meeting, focusing on latest developments in both optical and electron microscopy, as well as image analysis.
Register now: rms.org.uk/rms-event-calenda…
ALT Promotional image for Frontiers in Bioimaging 2024. White text giving event name and date (11-12 Nov) over biological micrograph with blue, green and red colours prominent.
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BioImage Archive retweeted
El periodo de aplicaciones ha iniciado.
Aplicaremos mejores prácticas en el uso de recursos públicos de bioimágenes, como @BioimageA e #IDR, dando pie al análisis de bioimágenes utilizando metodologías basadas en aprendizaje automático 🍃🐭🦠🐠🔬🖥️⌨️🤖
Apply for this course to learn how to best use public bioimaging data resources, centred around the BioImage Archive, to enable and enhance machine learning based image analysis.
Find out more: ebi.ac.uk/training/events/mi…
Limited registration fee waivers are available.
ALT Course at EMBL-EBI Microscopy data analysis: machine learning and the BioImage Archive 31 Mar - 4 Apr 2025 Virtual
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BioImage Archive retweeted
Join our #webinar next week to discover #WebAtlas, a tool for visualising #SpatialTranscriptomics data and #BioImageArchive, an #OpenAccess data archive for biological imaging data. Registration is free but essential: ebi.ac.uk/training/events/vi… #singlecell #spatialomics #DataScience
ALT Graphics image showing webinar at EMBL-EBI about Visualising integrated single cell and spatial transcriptomics datasets. The webinar will run on 09 October 2024 at 15:30 BST. The speakers are Omer Bayraktar and Aybuke Kupcu Yoldas. Image credit: Karen Arnott, EMBL-EBI
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BioImage Archive retweeted
What an amazing project 🤩! With BY-COVID, we mobilised multiple valuable COVID-19 image datasets to @BioImageA, who implemented recognition for the important role of Data Stewards towards sharing #FAIRdata. Check out all the project outcomes in this beautiful brochure ⤵️
🙌 The BY-COVID project was launched in autumn 2021 to support the response to #COVID19 and preparedness for future #infectiousdisease outbreaks.
✨ Check our highlight success stories in the past three years: by-covid.org/news/by-covid-s…
@HorizonEU @isidore_eu
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